Indica Labs – HALO

The gold standard image analysis platform for quantitative tissue analysis in digital pathology.

Pharmaceutical, healthcare and research organizations worldwide are using HALO for high-throughput, quantitative tissue analysis in oncology, neuroscience, metabolism, toxicology and more.

Scalability coupled with powerful analytic capabilities, and the fastest processing speeds available for digital pathology.

UNMATCHED EASE-OF-USE

HALO modules simplify the analysis workflow so there is no need to ‘build’ algorithms from scratch. Modules make HALO easy-to-use and understand which means you can spend less time learning software and more time analyzing data.

HALO add-ons can be used in combination with any of the other analysis modules to improve the analysis workflow. These include tools to help automate tissue segmentation, such as tissue classifier, serial section analysis, and TMA, as well as tools to improve image processing speeds for high-throughput labs, such as analysis cluster.

EXTENSIVE ANALYTICS

HALO reports morphological and multiplexed expression data on a cell-by-cell basis across entire tissue sections whilst maintaining an interactive link between cell data, including x, y coordinates, and cell image.

Sorting and filtering capabilities allow the user to mine millions of cells while visually assessing corresponding cell populations in the image. For example, sort cells according to biomarker intensity and immediately locate cells with highest intensity in the image.

MULTIPLEX ANALYSIS

The Multiplex IHC module in HALO can analyze up to five chromogenic stains in a section while the Highplex FL module can analyze an unlimited number of markers in fluorescence.

SCALABLE PLATFORM

HALO’s modular design and flexible licensing allow it to be adapted to any requirement and budget. Start with all the modules or just a few and add more modules as your needs change. Use HALO on a single workstation or ramp up to a server-based license for your entire group. Purchase a permanent license or renew annually.

Available HALO Modules

Highly Flexible and Oncology Modules

Tissue Classifier

Area Quantification

Area Quantification FL

Object Colocalization

Object Colocalization FL

Spatial Analysis

Tissue Microarray (TMA)

Multiplex IHC

Highplex FL

Cytonuclear IHC

Cytonuclear FL

Membrane IHC

Membrane FL

ISH and FISH Modules

FISH-IF (RNAScope®)

ISH-IHC (RNAScope®)

ISH (RNAScope®)

Multiplex FISH (RNAScope®) Indica Labs - Digital Pathology ISH-IHC (RNAScope®)

Amplification & Deletion FISH

Break Apart Fusion FISH

Other Research Modules

Islet IHC

Islet FL

Muscle Fiber

Muscle Fiber FL

Vacuole

Axon

Microglial Activation

Branch Structure

Serial Section Analysis

Analysis Cluster Add-on

Solution Type

AI Suite/Add-on

Deployment Environment

Research Use Only (RUO)

Platform Dependency

Requires Specific Platform

Deployment Options

Hybrid (Cloud analysis, local viewer)

5 reviews for Indica Labs – HALO

  1. Midie Xu

    Midie Xu

    Author: Midie Xu, Fudan University Shanghai Cancer Center

    “Advantage: 1. Batch export, diversified export formats 2. As long as the training is in place, the analysis results are very accurate, the interface operation is very friendly, and the annotation effect is also very good in similar slices Suggestions for Improvement: 1. The module effect of serial slice registration is not very good, it can be further developed 2. It would be better if the exported annotation file could be compatible with other software such as qupath 3. The app is too expensive, I hope to have a free web version, which is convenient for viewing the results and exporting data on a personal computer 4. Considering the large number of users in China, it is recommended to enable the Chinese interface”

  2. Anonymous User

    Anonymous User

    “HALO image analysis software is a user-friendly, precise and high quality image analysis tool. It is greatly improves the working efficiency of our digital pathology research and service.”

  3. Anonymous User

    Anonymous User

    “The software is modular and can be run on a server. This helps to increase the analysis power and while reducing the hardware requirement to do the analysis from individual’s side. It accepts multiple image formats for analysis which is a plus. The representatives were professional and helped in setting up more modules with ease. Since we have used other software, migrating to this one was easy and has few more analysis set up which was useful and increased its value among our researchers.”

  4. Anonymous User

    Anonymous User

    “Halo is simply the best whole-slide analysis software available. We have a large core facility, scanning over 15,000 brightfield and 2,000 fluorescence slides per year (plus many confocal microscopes, etc.). For whole-slide analysis, we formerly used Genie (from Aperio), and InForm (from Perkin Elmer), and we have collaborators using Definiens (no longer available) and Visiopharm. But now we have over 50 users per month working on Halo and the other platforms have been virtually shut down. Halo is very easy to get up and running – within a 2 hour session we can get a new user started with their own classification and cell counting application. Most users run a batch analysis overnight and collect and review their results in the morning. The team at Indica Labs are quick to respond when we have a challenging analysis project – they will WebEx in and help optimize the parameters. They have the experience (and courage) to tell us if the staining is just not suitable or a more complex classifier is required.”

  5. Anonymous User

    Anonymous User

    HALO is extremely straight forward and easy to use. Great and useful features include: 1. The real-time tuning tool to allow a live view of the effects of various analysis parameters for easy optimization. 2. Annotation tools make it easy to select regions of interest. 3. The ability to perform batch analysis on many images at once. 4. Useful and handy multi-panel figure maker that makes it easy for publication.

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